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shore::poissonifier Class Reference

Adaptive duplicate read filtering. More...

Public Types

typedef shore::alignment current_type
 
typedef shore::alignment append_type
 

Public Member Functions

 poissonifier (const size_t w=24)
 
shore::feed< shore::alignment > & duplicates ()
 
void set_verbose (const bool v, const bool w)
 
const shore::alignmentcurrent () const
 
bool has_data () const
 
void next ()
 
void append (const shore::alignment &f)
 
void flush ()
 
double get_lmax () const
 

Detailed Description

Adaptive duplicate read filtering.


The documentation for this class was generated from the following file: