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shore::eland_reader Class Reference

Reader for Illumina ELAND alignment files. More...

Public Types

typedef shore::alignment current_type
 

Public Member Functions

 eland_reader (const std::string &fn, const std::string &ref_fn, const std::string &reads_fn, const int max_mm)
 
const shore::alignmentcurrent () const
 
bool has_data ()
 
void next ()
 
shore::feed< shore::read > & leftovers ()
 

Detailed Description

Reader for Illumina ELAND alignment files.


The documentation for this class was generated from the following file: