shore::dna_iterator Class Reference

Iterate over DNA sequences in different encodings. More...

Inherits iterator_facade< dna_iterator, const shore::nuc::base, boost::random_access_traversal_tag, const shore::nuc::base >.

Public Member Functions
	dna_iterator (const char *const pt)
	dna_iterator (const shore::intpack::const_iterator &it)
void	set_complement (const bool comp)
	Set whether to return the complement of the element when dereferencing.

Static Public Member Functions
static dna_iterator	begin (const std::string &s)
static dna_iterator	end (const std::string &s)

Friends
class	boost::iterator_core_access

Detailed Description

Iterate over DNA sequences in different encodings.

This iterator decodes to shore::nuc::base independent of the underlying encoding.

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The documentation for this class was generated from the following file:

• shore/datatype/dna_iterator.hpp