Write genomic features to a gff file. More...

Public Types
typedef shore::annotation_entry	append_type

Public Member Functions
	gff_writer (const std::string &fn, const std::string &default_type="region", const bool signed_scores=true, const bool enumerate=false)

	gff_writer (std::ostream *const os, const std::string &default_type="region", const bool signed_scores=true, const bool enumerate=false)

void	signed_scores (const bool s)

void	append (const shore::segment &seg)

void	append (const shore::coverage &cov)

void	append (const shore::alignment &aln)

void	append (const shore::annotation_entry &ae)

void	flush ()

Detailed Description

Write genomic features to a gff file.

The documentation for this class was generated from the following file:

Public Types