alignment.hpp File Reference

File format independent short read alignment reader. More...

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Classes
class	shore::alignment_reader
	Merged read of alignment files in various formats. More...
struct	shore::alignment_reader::config
	Configuration that may be passed to the alignment_reader constructor. More...

Namespaces
	shore
	SHORE core API.

Constant Groups
	shore
	SHORE core API.

Typedefs
typedef shore::source < alignment_reader >	shore::alignment_source

Detailed Description

File format independent short read alignment reader.

Author

Felix Ott